BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C10SP1|AL425509
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1643 0.0
>3x_Contig1734
Length = 17938
Score = 1643 bits (826), Expect = 0.0
Identities = 833/838 (99%)
Strand = Plus / Minus
Query: 1 acctcttgcagttcttcctactctatgaatatagtctcttggatcatctggaggatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13231 acctcttgcagttcttcctactctatgaatatagtctcttggatcatctggaggatcaaa 13172
Query: 61 ttggatgatccaatctaccgctgggatatccaaacctcttgctgccacatcggtacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13171 ttggatgatccaatctaccgctgggatatccaaacctcttgctgccacatcggtacacac 13112
Query: 121 tagaataccacgttcagcgttacagaattcgaagaaagtgtttkttctcttctgttgctt 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13111 tagaataccacgttcagcgttacagaattcgaagaaagtgtttgttctcttctgttgctt 13052
Query: 181 ttgcttaccgtgcaattccaacactggtaaatcgatatagttcaaaagttcggcgtagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13051 ttgcttaccgtgcaattccaacactggtaaatcgatatagttcaaaagttcggcgtagta 12992
Query: 241 cttcacagaattacatgacgataagaaaacaatgactttcttcttttggtttctcttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12991 cttcacagaattacatgacgataagaaaacaatgactttcttcttttggtttctcttcaa 12932
Query: 301 gaacgagaacaatagtaggaatctcttatcgctctcgcaaacaacgtaaccttgttctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12931 gaacgagaacaatagtaggaatctcttatcgctctcgcaaacaacgtaaccttgttctaa 12872
Query: 361 cccatctgccgttgaagtatccttctcagaatccacgttaatgaacaagggacctggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12871 cccatctgccgttgaagtatccttctcagaatccacgttaatgaacaagggacctggtct 12812
Query: 421 caaagagatacgcgccaaatcctcaaccttagtggtctgtgtagcagagaaaagcatcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12811 caaagagatacgcgccaaatcctcaaccttagtggtctgtgtagcagagaaaagcatcga 12752
Query: 481 ttgtctatcctcgtttggtaagatcttgataatctgtctcatttcatcttcgaacccaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12751 ttgtctatcctcgtttggtaagatcttgataatctgtctcatttcatcttcgaacccaat 12692
Query: 541 ttccaagatacgatccgcttcatcgatgacaagagccttcaagttcttaaagatgaagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12691 ttccaagatacgatccgcttcatcgatgacaagagccttcaagttcttaaagatgaagcc 12632
Query: 601 cttagtgttttgtaaatkatccaacaaacgacctggagtagcaatcaagatgttaacacc 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12631 cttagtgttttgtaaatgatccaacaaacgacctggagtagcaatcaagatgttaacacc 12572
Query: 661 tttcattaacttatccgcttcttgtctacggtttgcacctccaatgacaataccaaaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12571 tttcattaacttatccgcttcttgtctacggtttgcacctccaatgacaataccaaaagt 12512
Query: 721 ttgactgtkgaattccatcaattcacgagcaacaccaaagatttgcaacgctaattctct 780
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12511 ttgactgtggaattccatcaattcacgagcaacaccaaagatttgcaacgctaattctct 12452
Query: 781 cgtaggagttatcacaatgacaccggtaccatttcttggcttkaatttcaaagaatgt 838
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 12451 cgtaggagtaatcacaatgacaccggtaccatttcttggcttgaatttcaaagaatgt 12394
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6309
Number of Sequences: 1807
Number of extensions: 6309
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)